[Ipopt] Compiling IPOPT on Ubuntu 11.10 64-bit with ATLAS

[David Veerasingam]

Hi Andreas,

Thanks for your reply!  got me past the configure stage, but my make still
fails.

1) I modified my configure statement to read as follows: (the options
-lblas and -llapack seemed to pick up the BLAS and Lapack in ThirdParty/,
not the ATLAS libraries)

./configure --with-blas="/usr/lib/atlas-base/atlas/libblas.so.3gf" \
 --with-lapack="/usr/lib/atlas-base/atlas/liblapack.so.3gf"

The configure worked fine:
========================================================================
<snipped>
checking whether user supplied
BLASLIB="/usr/lib/atlas-base/atlas/libblas.so.3gf.0" works... yes:
/usr/lib/atlas-base/atlas/libblas.so.3gf.0
checking whether user supplied
LAPACKLIB="/usr/lib/atlas-base/atlas/liblapack.so.3gf.0" works... yes:
/usr/lib/atlas-base/atlas/liblapack.so.3gf.0
/usr/lib/atlas-base/atlas/libblas.so.3gf.0
<snipped>
========================================================================


2) However, the "make" process still fails.
========================================================================
<snipped>
../../Interfaces/.libs/libipopt.a(IpLapack.o): In function
`Ipopt::IpLapackDpotrs(int, int, double const*, int, double*, int)':
IpLapack.cpp:(.text+0x50): undefined reference to `dpotrs_'
../../Interfaces/.libs/libipopt.a(IpLapack.o): In function
`Ipopt::IpLapackDpotrf(int, double*, int, int&)':
IpLapack.cpp:(.text+0x90): undefined reference to `dpotrf_'
../../Interfaces/.libs/libipopt.a(IpLapack.o): In function
`Ipopt::IpLapackDsyev(bool, int, double*, int, double*, int&)':
IpLapack.cpp:(.text+0x124): undefined reference to `dsyev_'
IpLapack.cpp:(.text+0x27c): undefined reference to `dsyev_'
../../Interfaces/.libs/libipopt.a(IpLapack.o): In function
`Ipopt::IpLapackDgetrf(int, double*, int*, int, int&)':
IpLapack.cpp:(.text+0x2dc): undefined reference to `dgetrf_'
../../Interfaces/.libs/libipopt.a(IpLapack.o): In function
`Ipopt::IpLapackDgetrs(int, int, double const*, int, int*, double*, int)':
IpLapack.cpp:(.text+0x348): undefined reference to `dgetrs_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDdot(int, double const*, int, double const*, int)':
IpBlas.cpp:(.text+0x21): undefined reference to `ddot_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDnrm2(int, double const*, int)':
IpBlas.cpp:(.text+0x47): undefined reference to `dnrm2_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDasum(int, double const*, int)':
IpBlas.cpp:(.text+0x67): undefined reference to `dasum_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasIdamax(int, double const*, int)':
IpBlas.cpp:(.text+0x87): undefined reference to `idamax_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDcopy(int, double const*, int, double*, int)':
IpBlas.cpp:(.text+0xb1): undefined reference to `dcopy_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDaxpy(int, double, double const*, int, double*, int)':
IpBlas.cpp:(.text+0xf2): undefined reference to `daxpy_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDscal(int, double, double*, int)':
IpBlas.cpp:(.text+0x125): undefined reference to `dscal_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDgemv(bool, int, int, double, double const*, int, double
const*, int, double, double*, int)':
IpBlas.cpp:(.text+0x1d6): undefined reference to `dgemv_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDsymv(int, double, double const*, int, double const*, int,
double, double*, int)':
IpBlas.cpp:(.text+0x25f): undefined reference to `dsymv_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDgemm(bool, bool, int, int, int, double, double const*, int,
double const*, int, double, double*, int)':
IpBlas.cpp:(.text+0x36a): undefined reference to `dgemm_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDsyrk(bool, int, int, double, double const*, int, double,
double*, int)':
IpBlas.cpp:(.text+0x41b): undefined reference to `dsyrk_'
../../Interfaces/.libs/libipopt.a(IpBlas.o): In function
`Ipopt::IpBlasDtrsm(bool, int, int, double, double const*, int, double*,
int)':
IpBlas.cpp:(.text+0x4fe): undefined reference to `dtrsm_'
../../Interfaces/.libs/libipopt.a(IpMa28Partition.o): In function
`ma28part_':
IpMa28Partition.F:(.text+0x156): undefined reference to `dcopy_'
/home/usual/INSTALLDIRS/Ipopt310/ThirdParty/HSL/.libs/libcoinhsl.a(ma57ad.o):
In function `mc71ad_':
ma57ad.f:(.text+0xb0a8): undefined reference to `idamax_'
ma57ad.f:(.text+0xb2e3): undefined reference to `idamax_'
/home/usual/INSTALLDIRS/Ipopt310/ThirdParty/HSL/.libs/libcoinhsl.a(ma57ad.o):
In function `ma57td_':
ma57ad.f:(.text+0xc9e2): undefined reference to `dgemm_'
ma57ad.f:(.text+0xca97): undefined reference to `dtpsv_'
/home/usual/INSTALLDIRS/Ipopt310/ThirdParty/HSL/.libs/libcoinhsl.a(ma57ad.o):
In function `ma57rd_':
ma57ad.f:(.text+0xd6d6): undefined reference to `dgemm_'
ma57ad.f:(.text+0xd765): undefined reference to `dtpsv_'
/home/usual/INSTALLDIRS/Ipopt310/ThirdParty/HSL/.libs/libcoinhsl.a(ma57ad.o):
In function `ma57yd_':
ma57ad.f:(.text+0xe06e): undefined reference to `dgemv_'
ma57ad.f:(.text+0xe0b8): undefined reference to `dtpsv_'
/home/usual/INSTALLDIRS/Ipopt310/ThirdParty/HSL/.libs/libcoinhsl.a(ma57ad.o):
In function `ma57qd_':
ma57ad.f:(.text+0xe7ae): undefined reference to `dtpsv_'
ma57ad.f:(.text+0xec86): undefined reference to `dgemm_'
/home/usual/INSTALLDIRS/Ipopt310/ThirdParty/HSL/.libs/libcoinhsl.a(ma57ad.o):
In function `ma57xd_':
ma57ad.f:(.text+0xedfa): undefined reference to `dtpsv_'
ma57ad.f:(.text+0xf1f9): undefined reference to `dgemv_'
/home/usual/INSTALLDIRS/Ipopt310/ThirdParty/HSL/.libs/libcoinhsl.a(ma57ad.o):
In function `ma57od_':
ma57ad.f:(.text+0x1517c): undefined reference to `dgemm_'
ma57ad.f:(.text+0x163a2): undefined reference to `dgemm_'
ma57ad.f:(.text+0x16478): undefined reference to `dgemm_'
collect2: ld returned 1 exit status
make[3]: *** [ipopt] Error 1
make[3]: Leaving directory
`/home/usual/INSTALLDIRS/Ipopt310/Ipopt/src/Apps/AmplSolver'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/home/usual/INSTALLDIRS/Ipopt310/Ipopt/src/Apps'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/usual/INSTALLDIRS/Ipopt310/Ipopt'
========================================================================

If one were to do an 'nm' on the static library, one notices for instance
that the dgemm symbol clearly exists.
========================================================================
% nm /usr/lib/atlas-base/atlas/libblas.a | grep dgemm
0000000000000000 T atl_f77wrap_dgemm_
ATL_dgemm.o:
0000000000000000 T ATL_dgemm
dgemm.o:
                 U atl_f77wrap_dgemm_
========================================================================

I'm baffled!

David


On Wed, Feb 15, 2012 at 10:12 PM, Andreas Waechter <awaechter.iems at gmail.com
> wrote:

> Hi David,
>
>
>  I was wondering if anyone here running Ubuntu has managed to successfully
>> compile IPOPT 3.10 with the system-packaged ATLAS?
>>
>> I'm running Ubuntu 11.10 64-bit.
>>
>
> I'm running the same OS.
>
>
>> In previous versions of Ubuntu, all I had to do was to link against
>> libblas.so.3 and liblapack.so.3 provided by the package libatlas-dev-sse2.
>> However, this package has been removed and replaced with a new package
>> called libatlas-base-dev (ATLAS 3.8.4), which provides two new libraries
>> named libf77blas.so and liblapack_atlas.so.
>>
>> IPOPT's configure script accepts libf77blas.so but fails for
>> liblapack_atlas.so.
>>
>> 1) Could it be that the new liblapack_atlas.so does not have the LAPACK
>> routines that IPOPT needs?
>> 2) Are there any workarounds or do I have to compile my own ATLAS from
>> scratch?
>>
>
> I have the same package installed (libatlas-base-dev).  If I understand
> correctly, all you have to do is to link with -lblas and -llapack.  Your
> "alternatives configurator" should be set up automatically to pick up
>
> /usr/lib/atlas-base/atlas/**libblas.so.3gf and
> /usr/lib/atlas-base/atlas/**liblapack.so.3gf
>
> If you look at the symbols in the static versions of those libraries
> (e.g., nm /usr/lib/atlas-base/atlas/**libblas.a) you will see the atlas
> symbols ATL_...  I guess this setup is meant to be a very convenient way to
> link with Atlas by just using -lblas and -llapack.
>
> Hope this is correct, and hopeful,
>
> Andreas
>
>
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